BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C01LP1|AL427127
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1316 1353 0.0
3x_Contig135 318 2e-86
>3x_Contig1316
Length = 8178
Score = 1353 bits (681), Expect = 0.0
Identities = 713/722 (98%), Gaps = 4/722 (0%)
Strand = Plus / Minus
Query: 268 taggaagtgcaggtttttcactttcgataattcaacagacaaatggataaagctcatcgc 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8178 taggaagtgcaggtttttcactttcgataattcaacagacaaatggataaagctcatcgc 8119
Query: 328 atcgaagagacttggacagccaccagcaggtttagtgcagaggaataacgtttgtgttgg 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8118 atcgaagagacttggacagccaccagcaggtttagtgcagaggaataacgtttgtgttgg 8059
Query: 388 tgaaccagggtctttcaaacataacaaaccaaaattatattacgggatgtccgcattgaa 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8058 tgaaccagggtctttcaaacataacaaaccaaaattatattacgggatgtccgcattgaa 7999
Query: 448 caatttatttggaaattccaaatcagacgcggcaggtacatcatcgattgcagcgttatt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7998 caatttatttggaaattccaaatcagacgcggcaggtacatcatcgattgcagcgttatt 7939
Query: 508 ctccaaacctaatcatgtcgatgagcgtaaagtaaagtcgaaagctaggactgtgctaac 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7938 ctccaaacctaatcatgtcgatgagcgtaaagtaaagtcgaaagctaggactgtgctaac 7879
Query: 568 tgagcctgaacaggataaggatgaacaagaagaagagaatgtccaggaaagtgcttctac 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7878 tgagcctgaacaggataaggatgaacaagaagaagagaatgtccaggaaagtgcttctac 7819
Query: 628 tgtctccgaag--rtangagaaagaacaggaagaacaggaagaacagccgaagaagaaaa 685
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7818 tgtctccgaaggagta-gagaaagaacaggaagaacaggaagaacagccgaagaagaaaa 7760
Query: 686 agaagaagaccaagaagaatgatgaagagaatgataatttggaagttcaatattattcta 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7759 agaagaagaccaagaagaatgatgaagagaatgataatttggaagttcaatattattcta 7700
Query: 746 aggtattaggtgattctaaatctaaagatgaacctaaggatgaacctaaggacgactctt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7699 aggtattaggtgattctaaatctaaagatgaacctaaggatgaacctaaggacgactctt 7640
Query: 806 ccgatagtgataatgaagatgaagcaactgcagtcgataagtcttcgattaccggcacga 865
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7639 ccgatagtgataatgaagatgaagcaactgcagtcgataagtcttcgattaccggcacgg 7580
Query: 866 aatctgaatctgctaaagttatcaatttgaaagaaaa-gractagccaaggctgagagaa 924
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 7579 aatctgaatctgctaaagttatcaatttgaaagaaaaggaactagccaaggctgagagaa 7520
Query: 925 caatttttattggggatgtaccaaatgaggktatcacatcaaagaaagtttacaaagaat 984
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 7519 caatttttattgggaatgtaccaaatgaggttatcacatcaaagaaagtttacaaagaat 7460
Query: 985 tt 986
||
Sbjct: 7459 tt 7458
>3x_Contig135
Length = 751
Score = 318 bits (160), Expect = 2e-86
Identities = 163/164 (99%)
Strand = Plus / Plus
Query: 1 atctatgtattgattgctgactggccttaactatatgttcatgctaaaatcagactgtat 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 588 atctatgtattgattgctgactggccataactatatgttcatgctaaaatcagactgtat 647
Query: 61 ttttattcttaacttatatttcggcatttcagcactatttacagtttgtacgttttttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ttttattcttaacttatatttcggcatttcagcactatttacagtttgtacgttttttaa 707
Query: 121 ggaaaaggaacatgatgttacccggccatatagtacattccacg 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ggaaaaggaacatgatgttacccggccatatagtacattccacg 751
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,106
Number of Sequences: 1807
Number of extensions: 10106
Number of successful extensions: 130
Number of sequences better than 1.0e-20: 2
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)